CALM1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| CALM1 | Calmodulin 1, CPVT4, ,CAMI, PHKD, DD132 | calmodulin 1 (phosphorylase kinase, delta) |  |
 |
 |
 |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
Homo sapiens calmodulin 1 (phosphorylase kinase, delta) (CALM1), mRNA. This gene encodes a member of the EF-hand calcium-binding protein family. It is one of three genes which encode an identical calcium binding protein which is one of the four subunits of phosphorylase kinase. Two pseudogenes have been identified on chromosome 7 and X. Multiple transcript variants encoding different isoforms have been found for this gene.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 620 | 483 | 650 | 505 | 820 | 278 | 655 | 663 | 676 |
Read_Max |  | R. aegyptiacus | Transcriptome | 2355 | 2026 | 965 | 1565 | 1448 | 1797 | 1569 | 1812 | 2444 |
Read_Max |  | R. aegyptiacus | Genome | 2611 | 1708 | 826 | 2043 | 1263 | 1069 | 1385 | 2261 | 2697 |
DESeq | | H. sapiens | Genome | 6717.87 | 6063.12 | 6622.15 | 6215.44 | 6303.81 | 2030.15 | 6163.36 | 5685.18 | 7827.72 |
DESeq | | R. aegyptiacus | Transcriptome | 6647.35 | 6461.03 | 4096.81 | 5632.36 | 5679.04 | 5904.92 | 6674.32 | 5598.56 | 6860.47 |
DESeq | | R. aegyptiacus | Genome | 18335.09 | 15842.38 | 12844.83 | 17956.4 | 16956.31 | 17129.59 | 20377.65 | 15769.32 | 18990.33 |