MEGF9

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
MEGF9	EGFL5, KIAA0818	multiple EGF-like-domains 9	NM_001080497	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The multiple EGF-like (epidermal growth factor-like) domains 9 gene is an integral component of membrane. In human infected with Ebola this gene seems to be slightly upregulated at 3 hours post infection and downregulated at 23 hours post infection.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	267	245	286	198	377	184	328	413	449
Read_Max		R. aegyptiacus	Transcriptome	79	86	42	76	76	41	82	87	74
Read_Max		R. aegyptiacus	Genome	92	73	37	84	58	25	72	112	85
DESeq		H. sapiens	Genome	4864.87	4466.0	5311.62	4869.44	5101.45	2718.38	5169.49	6371.82	9560.95
DESeq		R. aegyptiacus	Transcriptome	675.63	688.12	479.84	586.11	632.87	289.72	795.26	570.26	500.46
DESeq		R. aegyptiacus	Genome	1717.06	1382.72	1073.38	1988.79	1527.99	892.9	2126.49	1430.47	1304.84

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	4864.87	4869.44	5169.49	0.0	0.09	0.09
7h	4466.0	5101.45	6371.82	0.19	0.51	0.32
23h	5311.62	2718.38	9560.95	-0.97	0.85	1.81

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	4864.87	4466.0	5311.62	-0.12	0.13	0.25
Ebov	4869.44	5101.45	2718.38	0.07	-0.84	-0.91
Marv	5169.49	6371.82	9560.95	0.3	0.89	0.59

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	675.63	586.11	795.26	-0.21	0.24	0.44
7h	688.12	632.87	570.26	-0.12	-0.27	-0.15
23h	479.84	289.72	500.46	-0.73	0.06	0.79

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	675.63	688.12	479.84	0.03	-0.49	-0.52
Ebov	586.11	632.87	289.72	0.11	-1.02	-1.13
Marv	795.26	570.26	500.46	-0.48	-0.67	-0.19