TLN1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
TLN1	ILWEQ, TLN	talin 1	NM_006289	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The talin 1 gene is involved in the Rap1 signaling pathway, Focal adhesion, Platelet activation and HTLV-I infection. It seems to be slightly upregulated during ebola infection in human.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	532	658	461	524	753	1818	773	830	622
Read_Max		R. aegyptiacus	Transcriptome	751	597	428	547	461	545	432	586	631
Read_Max		R. aegyptiacus	Genome	952	673	428	646	404	358	416	783	785
DESeq		H. sapiens	Genome	14548.98	18262.84	13814.17	16939.0	15796.63	48262.45	17493.34	19511.55	22193.75
DESeq		R. aegyptiacus	Transcriptome	23313.22	19801.35	16534.5	17873.01	17801.69	20721.82	19212.25	16982.06	18891.21
DESeq		R. aegyptiacus	Genome	27657.75	20666.84	18203.91	25078.13	21137.34	24404.64	22601.97	19041.8	21497.26

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	14548.98	16939.0	17493.34	0.22	0.27	0.05
7h	18262.84	15796.63	19511.55	-0.21	0.1	0.3
23h	13814.17	48262.45	22193.75	1.8	0.68	-1.12

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	14548.98	18262.84	13814.17	0.33	-0.07	-0.4
Ebov	16939.0	15796.63	48262.45	-0.1	1.51	1.61
Marv	17493.34	19511.55	22193.75	0.16	0.34	0.19

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	23313.22	17873.01	19212.25	-0.38	-0.28	0.1
7h	19801.35	17801.69	16982.06	-0.15	-0.22	-0.07
23h	16534.5	20721.82	18891.21	0.33	0.19	-0.13

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	23313.22	19801.35	16534.5	-0.24	-0.5	-0.26
Ebov	17873.01	17801.69	20721.82	-0.01	0.21	0.22
Marv	19212.25	16982.06	18891.21	-0.18	-0.02	0.15