BRPF3

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
BRPF3 KIAA1286 bromodomain and PHD finger containing, 3 NM_015695 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

There is not that much known about the gene. Seems to have a differential splicing between mock, ebola and marburg treatmetns.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome161 204 159 177 260 496 234 248 125
Read_Max
batR. aegyptiacusTranscriptome 82 74 42 68 54 63 51 60 71
Read_Max
bat_genomeR. aegyptiacusGenome 94 77 36 84 47 37 47 74 95
DESeq
humanH. sapiensGenome 4723.82 5289.04 3760.83 4907.08 4785.22 11802.19 5142.3 5154.41 3520.74
DESeq
batR. aegyptiacusTranscriptome 1225.08 1221.84 882.95 972.52 1076.38 1162.28 1184.6 942.05 966.68
DESeq
bat_genomeR. aegyptiacusGenome 1889.8 1515.97 1376.87 1954.23 1579.33 1879.79 1845.36 1524.84 1542.0

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 4723.82 4907.08 5142.3 0.05 0.12 0.07
7h 5289.04 4785.22 5154.41 -0.14 -0.04 0.11
23h 3760.83 11802.19 3520.74 1.65 -0.1 -1.75

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 4723.82 5289.04 3760.83 0.16 -0.33 -0.49
Ebov 4907.08 4785.22 11802.19 -0.04 1.27 1.3
Marv 5142.3 5154.41 3520.74 0.0 -0.55 -0.55

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1225.08 972.52 1184.6 -0.33 -0.05 0.28
7h 1221.84 1076.38 942.05 -0.18 -0.38 -0.19
23h 882.95 1162.28 966.68 0.4 0.13 -0.27

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1225.08 1221.84 882.95 -0.0 -0.47 -0.47
Ebov 972.52 1076.38 1162.28 0.15 0.26 0.11
Marv 1184.6 942.05 966.68 -0.33 -0.29 0.04