LRRC8A

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
LRRC8A	KIAA1437, FLJ10337, SWELL1	leucine rich repeat containing 8 family, member A	NM_019594	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Involved in B-cell development. Expression pattern different between treatments and species.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	455	292	211	250	328	765	372	417	304
Read_Max		R. aegyptiacus	Transcriptome	130	119	129	125	114	245	108	175	183
Read_Max		R. aegyptiacus	Genome	173	149	134	139	105	171	110	270	231
DESeq		H. sapiens	Genome	7259.77	3914.25	3121.45	4625.33	3785.29	10475.74	5059.84	4381.44	5222.44
DESeq		R. aegyptiacus	Transcriptome	1465.36	1458.75	1740.47	1609.83	1694.01	2820.15	1348.12	1499.74	2011.96
DESeq		R. aegyptiacus	Genome	2315.2	2517.18	2707.99	2385.76	2788.1	4839.15	2372.76	2398.66	3319.46

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	7259.77	4625.33	5059.84	-0.65	-0.52	0.13
7h	3914.25	3785.29	4381.44	-0.05	0.16	0.21
23h	3121.45	10475.74	5222.44	1.75	0.74	-1.0

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	7259.77	3914.25	3121.45	-0.89	-1.22	-0.33
Ebov	4625.33	3785.29	10475.74	-0.29	1.18	1.47
Marv	5059.84	4381.44	5222.44	-0.21	0.05	0.25

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1465.36	1609.83	1348.12	0.14	-0.12	-0.26
7h	1458.75	1694.01	1499.74	0.22	0.04	-0.18
23h	1740.47	2820.15	2011.96	0.7	0.21	-0.49

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1465.36	1458.75	1740.47	-0.01	0.25	0.25
Ebov	1609.83	1694.01	2820.15	0.07	0.81	0.74
Marv	1348.12	1499.74	2011.96	0.15	0.58	0.42