SLC35D1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
SLC35D1 UGTrel7,UGTREL7, KIAA0260 solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1 NM_015139 pdf

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Description

Transports both UDP-glucuronic acid (UDP-GlcA) and UDP- N-acetylgalactosamine (UDP-GalNAc) from the cytoplasm to into the endoplasmic reticulum lumen.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome445 334 218 361 457 133 433 305 135
Read_Max
batR. aegyptiacusTranscriptome 118 108 65 107 103 91 97 98 97
Read_Max
bat_genomeR. aegyptiacusGenome 149 117 66 111 82 57 104 159 109
DESeq
humanH. sapiensGenome 12272.82 8859.62 7389.6 10929.88 9319.04 3382.92 10993.25 7098.43 4723.35
DESeq
batR. aegyptiacusTranscriptome 756.29 696.29 591.0 739.94 688.72 546.35 780.8 671.06 448.85
DESeq
bat_genomeR. aegyptiacusGenome 2005.82 1858.23 1413.69 1872.27 1928.68 1467.28 2201.83 1727.04 1184.11

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 12272.82 10929.88 10993.25 -0.17 -0.16 0.01
7h 8859.62 9319.04 7098.43 0.07 -0.32 -0.39
23h 7389.6 3382.92 4723.35 -1.13 -0.65 0.48

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 12272.82 8859.62 7389.6 -0.47 -0.73 -0.26
Ebov 10929.88 9319.04 3382.92 -0.23 -1.69 -1.46
Marv 10993.25 7098.43 4723.35 -0.63 -1.22 -0.59

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 756.29 739.94 780.8 -0.03 0.05 0.08
7h 696.29 688.72 671.06 -0.02 -0.05 -0.04
23h 591.0 546.35 448.85 -0.11 -0.4 -0.28

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 756.29 696.29 591.0 -0.12 -0.36 -0.24
Ebov 739.94 688.72 546.35 -0.1 -0.44 -0.33
Marv 780.8 671.06 448.85 -0.22 -0.8 -0.58