PRKAA2

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
PRKAA2	AMPK subunit alpha2,AMPK, AMPKa2	protein kinase, AMP-activated, alpha 2 catalytic subunit	NM_006252	pdf			NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Catalytic subunit of AMP-activated protein kinase (AMPK), an energy sensor protein kinase that plays a key role in regulating cellular energy metabolism.Interesting differential expression of not infected vs infected cells.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	93	107	106	68	131	314	94	106	124
Read_Max		R. aegyptiacus	Transcriptome	43	42	33	56	48	52	41	53	75
Read_Max		R. aegyptiacus	Genome	49	59	20	25	31	18	36	49	43
DESeq		H. sapiens	Genome	2418.22	2293.67	2420.51	2075.9	2391.89	6549.03	1964.18	1916.24	3191.28
DESeq		R. aegyptiacus	Transcriptome	326.13	256.97	275.85	378.26	330.62	314.1	339.17	304.22	348.26
DESeq		R. aegyptiacus	Genome	510.48	579.55	459.7	323.89	491.1	417.73	486.92	470.22	525.7

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	2418.22	2075.9	1964.18	-0.22	-0.3	-0.08
7h	2293.67	2391.89	1916.24	0.06	-0.26	-0.32
23h	2420.51	6549.03	3191.28	1.44	0.4	-1.04

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	2418.22	2293.67	2420.51	-0.08	0.0	0.08
Ebov	2075.9	2391.89	6549.03	0.2	1.66	1.45
Marv	1964.18	1916.24	3191.28	-0.04	0.7	0.74

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	326.13	378.26	339.17	0.21	0.06	-0.16
7h	256.97	330.62	304.22	0.36	0.24	-0.12
23h	275.85	314.1	348.26	0.19	0.34	0.15

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	326.13	256.97	275.85	-0.34	-0.24	0.1
Ebov	378.26	330.62	314.1	-0.19	-0.27	-0.07
Marv	339.17	304.22	348.26	-0.16	0.04	0.2