GMCL1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
GMCL1	FLJ13057, BTBD13, GCL1, SPATA29	germ cell-less, spermatogenesis associated 1	NM_178439	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Without a defined function. Possible splicing variant for marburg infected cells in humans (not much frequency).

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	119	162	166	112	184	65	147	196	144
Read_Max		R. aegyptiacus	Transcriptome	96	86	67	116	111	88	79	125	87
Read_Max		R. aegyptiacus	Genome	101	119	60	81	88	47	74	160	97
DESeq		H. sapiens	Genome	1411.55	1515.51	1718.59	1302.52	1556.99	557.64	1268.56	1439.83	1430.86
DESeq		R. aegyptiacus	Transcriptome	715.96	602.8	718.04	971.61	1016.15	529.67	813.06	904.05	636.91
DESeq		R. aegyptiacus	Genome	1077.68	1412.84	938.37	963.78	1340.48	754.53	1310.08	1337.7	887.87

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1411.55	1302.52	1268.56	-0.12	-0.15	-0.04
7h	1515.51	1556.99	1439.83	0.04	-0.07	-0.11
23h	1718.59	557.64	1430.86	-1.62	-0.26	1.36

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1411.55	1515.51	1718.59	0.1	0.28	0.18
Ebov	1302.52	1556.99	557.64	0.26	-1.22	-1.48
Marv	1268.56	1439.83	1430.86	0.18	0.17	-0.01

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	715.96	971.61	813.06	0.44	0.18	-0.26
7h	602.8	1016.15	904.05	0.75	0.58	-0.17
23h	718.04	529.67	636.91	-0.44	-0.17	0.27

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	715.96	602.8	718.04	-0.25	0.0	0.25
Ebov	971.61	1016.15	529.67	0.06	-0.88	-0.94
Marv	813.06	904.05	636.91	0.15	-0.35	-0.51