SERINC5

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
SERINC5	TPO1	serine incorporator 5	NM_178276	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	255	186	234	195	273	143	213	254	274
Read_Max		R. aegyptiacus	Transcriptome	143	127	190	187	141	134	100	201	194
Read_Max		R. aegyptiacus	Genome	179	204	164	125	121	83	91	253	214
DESeq		H. sapiens	Genome	8088.85	5593.98	6566.55	5950.8	5905.46	3155.27	5744.94	5037.71	9350.01
DESeq		R. aegyptiacus	Transcriptome	1010.01	893.26	1762.46	1396.48	1277.87	1135.33	1011.06	1431.17	1365.55
DESeq		R. aegyptiacus	Genome	2665.83	3397.93	4299.09	2515.12	3307.1	3110.79	2556.06	3465.17	3417.06

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	8088.85	5950.8	5744.94	-0.44	-0.49	-0.05
7h	5593.98	5905.46	5037.71	0.08	-0.15	-0.23
23h	6566.55	3155.27	9350.01	-1.06	0.51	1.57

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	8088.85	5593.98	6566.55	-0.53	-0.3	0.23
Ebov	5950.8	5905.46	3155.27	-0.01	-0.92	-0.9
Marv	5744.94	5037.71	9350.01	-0.19	0.7	0.89

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1010.01	1396.48	1011.06	0.47	0.0	-0.47
7h	893.26	1277.87	1431.17	0.52	0.68	0.16
23h	1762.46	1135.33	1365.55	-0.63	-0.37	0.27

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1010.01	893.26	1762.46	-0.18	0.8	0.98
Ebov	1396.48	1277.87	1135.33	-0.13	-0.3	-0.17
Marv	1011.06	1431.17	1365.55	0.5	0.43	-0.07