SERINC5

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
SERINC5 TPO1 serine incorporator 5 NM_178276 pdf

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Description

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome255 186 234 195 273 143 213 254 274
Read_Max
batR. aegyptiacusTranscriptome 143 127 190 187 141 134 100 201 194
Read_Max
bat_genomeR. aegyptiacusGenome 179 204 164 125 121 83 91 253 214
DESeq
humanH. sapiensGenome 8088.85 5593.98 6566.55 5950.8 5905.46 3155.27 5744.94 5037.71 9350.01
DESeq
batR. aegyptiacusTranscriptome 1010.01 893.26 1762.46 1396.48 1277.87 1135.33 1011.06 1431.17 1365.55
DESeq
bat_genomeR. aegyptiacusGenome 2665.83 3397.93 4299.09 2515.12 3307.1 3110.79 2556.06 3465.17 3417.06

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 8088.85 5950.8 5744.94 -0.44 -0.49 -0.05
7h 5593.98 5905.46 5037.71 0.08 -0.15 -0.23
23h 6566.55 3155.27 9350.01 -1.06 0.51 1.57

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 8088.85 5593.98 6566.55 -0.53 -0.3 0.23
Ebov 5950.8 5905.46 3155.27 -0.01 -0.92 -0.9
Marv 5744.94 5037.71 9350.01 -0.19 0.7 0.89

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1010.01 1396.48 1011.06 0.47 0.0 -0.47
7h 893.26 1277.87 1431.17 0.52 0.68 0.16
23h 1762.46 1135.33 1365.55 -0.63 -0.37 0.27

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1010.01 893.26 1762.46 -0.18 0.8 0.98
Ebov 1396.48 1277.87 1135.33 -0.13 -0.3 -0.17
Marv 1011.06 1431.17 1365.55 0.5 0.43 -0.07