SCRN1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
SCRN1 KIAA0193 secernin 1 NM_014766 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Function undetermined.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome236 259 285 247 316 838 329 344 350
Read_Max
batR. aegyptiacusTranscriptome 195 180 191 238 182 181 124 251 264
Read_Max
bat_genomeR. aegyptiacusGenome 211 262 163 174 169 112 119 358 313
DESeq
humanH. sapiensGenome 5386.47 5051.41 6597.33 5730.65 5672.96 16635.57 5545.81 5552.49 8721.52
DESeq
batR. aegyptiacusTranscriptome 1397.31 1438.78 1860.18 1957.78 1752.05 1560.07 1251.34 1826.92 2114.3
DESeq
bat_genomeR. aegyptiacusGenome 2934.82 3923.63 3870.63 3175.75 3909.82 3991.94 3072.22 3947.29 4659.4

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 5386.47 5730.65 5545.81 0.09 0.04 -0.05
7h 5051.41 5672.96 5552.49 0.17 0.14 -0.03
23h 6597.33 16635.57 8721.52 1.33 0.4 -0.93

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 5386.47 5051.41 6597.33 -0.09 0.29 0.39
Ebov 5730.65 5672.96 16635.57 -0.01 1.54 1.55
Marv 5545.81 5552.49 8721.52 0.0 0.65 0.65

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1397.31 1957.78 1251.34 0.49 -0.16 -0.65
7h 1438.78 1752.05 1826.92 0.28 0.34 0.06
23h 1860.18 1560.07 2114.3 -0.25 0.18 0.44

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1397.31 1438.78 1860.18 0.04 0.41 0.37
Ebov 1957.78 1752.05 1560.07 -0.16 -0.33 -0.17
Marv 1251.34 1826.92 2114.3 0.55 0.76 0.21