ZAK

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
ZAK MRK pdf NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Stress-activated component of a protein kinase signal transduction cascade. Alternative splicing for treatments. Expression varies between infected vs non infected.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome121 126 135 122 189 432 176 196 222
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA
DESeq
humanH. sapiensGenome 2649.59 2741.4 2607.16 2901.76 2757.72 7608.35 2946.65 2711.6 3605.55
DESeq
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
DESeq
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2649.59 2901.76 2946.65 0.13 0.15 0.02
7h 2741.4 2757.72 2711.6 0.01 -0.02 -0.02
23h 2607.16 7608.35 3605.55 1.55 0.47 -1.08

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2649.59 2741.4 2607.16 0.05 -0.02 -0.07
Ebov 2901.76 2757.72 7608.35 -0.07 1.39 1.46
Marv 2946.65 2711.6 3605.55 -0.12 0.29 0.41

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h NA NA NA NA NA NA
7h NA NA NA NA NA NA
23h NA NA NA NA NA NA

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock NA NA NA NA NA NA
Ebov NA NA NA NA NA NA
Marv NA NA NA NA NA NA