LPP

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
LPP		LIM domain containing preferred translocation partner in lipoma	NM_005578	pdf	NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The encoded protein localizes to the cell periphery in focal adhesions and may be involved in cell-cell adhesion and cell motility. Gene too big for IGV view format, results need to be recheck with another tool.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	290	136	252	118	369	630	136	165	473
Read_Max		R. aegyptiacus	Transcriptome	173	141	98	149	142	125	102	147	120
Read_Max		R. aegyptiacus	Genome	223	192	124	149	137	123	127	226	220
DESeq		H. sapiens	Genome	6966.5	5819.37	5531.03	5070.2	7005.38	14640.63	4602.82	4841.87	10170.96
DESeq		R. aegyptiacus	Transcriptome	1649.36	1128.35	1211.54	1359.85	1240.64	1253.39	1131.2	1064.33	832.85
DESeq		R. aegyptiacus	Genome	12294.43	10440.2	9732.93	8217.84	9900.11	13262.97	11236.32	8689.1	9686.1

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	6966.5	5070.2	4602.82	-0.46	-0.6	-0.14
7h	5819.37	7005.38	4841.87	0.27	-0.27	-0.53
23h	5531.03	14640.63	10170.96	1.4	0.88	-0.53

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	6966.5	5819.37	5531.03	-0.26	-0.33	-0.07
Ebov	5070.2	7005.38	14640.63	0.47	1.53	1.06
Marv	4602.82	4841.87	10170.96	0.07	1.14	1.07

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1649.36	1359.85	1131.2	-0.28	-0.54	-0.27
7h	1128.35	1240.64	1064.33	0.14	-0.08	-0.22
23h	1211.54	1253.39	832.85	0.05	-0.54	-0.59

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1649.36	1128.35	1211.54	-0.55	-0.45	0.1
Ebov	1359.85	1240.64	1253.39	-0.13	-0.12	0.01
Marv	1131.2	1064.33	832.85	-0.09	-0.44	-0.35