LOC100652751

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
LOC100652751 SCD (not annotated in APG or GOI) pdf NONE NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Overlaps with the gene SCD. This enzyme is involved in fatty acid biosynthesis. The annotation seems incomplete, missing 4 upstream exons connected via the sashimi plot (figures).

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome7410 5876 8633 5491 8995 3370 6665 6360 5230
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA
DESeq
humanH. sapiensGenome 43723.09 33234.58 48844.0 34237.46 41223.29 17109.3 32883.02 28962.27 33455.4
DESeq
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
DESeq
bat_genomeR. aegyptiacusGenome NA NA NA NA NA NA NA NA NA

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 43723.09 34237.46 32883.02 -0.35 -0.41 -0.06
7h 33234.58 41223.29 28962.27 0.31 -0.2 -0.51
23h 48844.0 17109.3 33455.4 -1.51 -0.55 0.97

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 43723.09 33234.58 48844.0 -0.4 0.16 0.56
Ebov 34237.46 41223.29 17109.3 0.27 -1.0 -1.27
Marv 32883.02 28962.27 33455.4 -0.18 0.02 0.21

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h NA NA NA NA NA NA
7h NA NA NA NA NA NA
23h NA NA NA NA NA NA

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock NA NA NA NA NA NA
Ebov NA NA NA NA NA NA
Marv NA NA NA NA NA NA