NUCKS1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| NUCKS1 | NUCKS | nuclear casein kinase and cyclin-dependent kinase substrate 1 | NM_022731 |  |
 |
 |
 |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
The nuclear casein kinase and cyclin-dependent kinase substrate 1 gene is involved in poly(A) RNA binding. It seems to be downregulated after 23 hours of Ebola and Marburg virus infection in humans, and also after 23 hours of Ebola infection in bats.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 3776 | 3284 | 3353 | 3400 | 5060 | 1898 | 4172 | 4351 | 2446 |
Read_Max |  | R. aegyptiacus | Transcriptome | 2605 | 2230 | 1555 | 2662 | 2684 | 1569 | 2615 | 2912 | 1919 |
Read_Max |  | R. aegyptiacus | Genome | 3170 | 3040 | 1476 | 2384 | 2075 | 1025 | 2415 | 3865 | 2342 |
DESeq | | H. sapiens | Genome | 67113.93 | 48815.18 | 55229.85 | 57557.59 | 57235.98 | 20896.53 | 55969.3 | 43177.91 | 47167.93 |
DESeq | | R. aegyptiacus | Transcriptome | 8771.23 | 7811.67 | 6758.54 | 8722.74 | 9356.35 | 5880.54 | 11226.29 | 8798.47 | 6075.85 |
DESeq | | R. aegyptiacus | Genome | 15460.43 | 16808.01 | 10852.05 | 14473.55 | 17009.88 | 10667.81 | 20591.31 | 16554.33 | 10358.21 |