UBR5

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
UBR5 DD5, EDD, EDD1, HYD, KIAA0896 ubiquitin protein ligase E3 component n-recognin 5 NM_015902 pdf

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Description

The ubiquitin protein ligase E3 component n-recognin 5 gene is involved in Ubiquitin mediated proteolysis. It did not show any particular interesting differential expression on the samples analyzed, except for a slight downregulation in the bat control.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome193 191 238 200 240 552 211 235 169
Read_Max
batR. aegyptiacusTranscriptome 265 220 132 236 204 334 228 237 190
Read_Max
bat_genomeR. aegyptiacusGenome 298 254 128 216 189 220 192 288 211
DESeq
humanH. sapiensGenome 8437.94 7697.98 9323.62 7926.47 8414.23 21757.14 7650.23 6603.63 8098.47
DESeq
batR. aegyptiacusTranscriptome 3556.47 3062.64 2408.65 3215.0 3437.39 4375.37 3643.02 2922.47 2439.69
DESeq
bat_genomeR. aegyptiacusGenome 10212.99 9374.19 6994.81 8771.82 9897.88 12876.56 10649.32 8525.76 6847.82

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 8437.94 7926.47 7650.23 -0.09 -0.14 -0.05
7h 7697.98 8414.23 6603.63 0.13 -0.22 -0.35
23h 9323.62 21757.14 8098.47 1.22 -0.2 -1.43

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 8437.94 7697.98 9323.62 -0.13 0.14 0.28
Ebov 7926.47 8414.23 21757.14 0.09 1.46 1.37
Marv 7650.23 6603.63 8098.47 -0.21 0.08 0.29

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 3556.47 3215.0 3643.02 -0.15 0.03 0.18
7h 3062.64 3437.39 2922.47 0.17 -0.07 -0.23
23h 2408.65 4375.37 2439.69 0.86 0.02 -0.84

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 3556.47 3062.64 2408.65 -0.22 -0.56 -0.35
Ebov 3215.0 3437.39 4375.37 0.1 0.44 0.35
Marv 3643.02 2922.47 2439.69 -0.32 -0.58 -0.26