EIF2A
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| EIF2A | EIF-2A | eukaryotic translation initiation factor 2A, 65kDa | NM_032025 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
EIF2A is a 65-kD protein that catalyzes the formation of puromycin-sensitive 80S preinitiation complexes
No abnormalities have been observed. The gene is slightly downregulated in Ebola and Marburg samples from human cells cells. The ENSEMBL annotation misses about 20\,000\,bp at the 3$'$ end.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 186 | 190 | 193 | 190 | 243 | 502 | 221 | 262 | 196 |
Read_Max |  | R. aegyptiacus | Transcriptome | 404 | 364 | 172 | 248 | 201 | 232 | 277 | 238 | 252 |
Read_Max |  | R. aegyptiacus | Genome | 439 | 257 | 146 | 336 | 162 | 136 | 235 | 288 | 269 |
DESeq | | H. sapiens | Genome | 2317.76 | 2272.26 | 2351.02 | 2406.7 | 2456.92 | 5012.03 | 2409.8 | 2305.53 | 2675.87 |
DESeq | | R. aegyptiacus | Transcriptome | 2602.91 | 2573.39 | 1684.28 | 2237.06 | 2310.54 | 2183.69 | 2904.38 | 2164.84 | 1907.87 |
DESeq | | R. aegyptiacus | Genome | 3179.74 | 2878.61 | 2016.21 | 3213.27 | 3029.19 | 2810.55 | 3709.83 | 2785.62 | 2512.07 |