MAPKAPK2

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
MAPKAPK2	MK2, MAPKAP-K2, MK-2	mitogen-activated protein kinase-activated protein kinase 2	NM_004759	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens mitogen-activated protein kinase-activated protein kinase 2 (MAPKAPK2), transcript variant 1, mRNA.

Strong expression in human cells, small differences in profile. No reads in bat cells.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	400	362	280	338	334	460	365	431	299
Read_Max		R. aegyptiacus	Transcriptome	1053	906	691	825	749	1067	828	1010	1194
Read_Max		R. aegyptiacus	Genome	1112	801	575	814	634	610	678	1201	1259
DESeq		H. sapiens	Genome	3995.2	3329.87	2536.67	3512.02	2572.36	4010.61	3496.66	3265.55	3163.0
DESeq		R. aegyptiacus	Transcriptome	5236.76	5123.09	3947.79	4107.77	4102.11	5109.35	4881.13	4075.86	5026.2
DESeq		R. aegyptiacus	Genome	5757.05	4403.7	4351.53	5838.0	4638.65	5679.84	5450.61	4369.13	5314.38

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	3995.2	3512.02	3496.66	-0.19	-0.19	-0.01
7h	3329.87	2572.36	3265.55	-0.37	-0.03	0.34
23h	2536.67	4010.61	3163.0	0.66	0.32	-0.34

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	3995.2	3329.87	2536.67	-0.26	-0.66	-0.39
Ebov	3512.02	2572.36	4010.61	-0.45	0.19	0.64
Marv	3496.66	3265.55	3163.0	-0.1	-0.14	-0.05

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	5236.76	4107.77	4881.13	-0.35	-0.1	0.25
7h	5123.09	4102.11	4075.86	-0.32	-0.33	-0.01
23h	3947.79	5109.35	5026.2	0.37	0.35	-0.02

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	5236.76	5123.09	3947.79	-0.03	-0.41	-0.38
Ebov	4107.77	4102.11	5109.35	-0.0	0.31	0.32
Marv	4881.13	4075.86	5026.2	-0.26	0.04	0.3