MAPKAPK2

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
MAPKAPK2 MK2, MAPKAP-K2, MK-2 mitogen-activated protein kinase-activated protein kinase 2 NM_004759 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens mitogen-activated protein kinase-activated protein kinase 2 (MAPKAPK2), transcript variant 1, mRNA.

Strong expression in human cells, small differences in profile. No reads in bat cells.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome400 362 280 338 334 460 365 431 299
Read_Max
batR. aegyptiacusTranscriptome 1053 906 691 825 749 1067 828 1010 1194
Read_Max
bat_genomeR. aegyptiacusGenome 1112 801 575 814 634 610 678 1201 1259
DESeq
humanH. sapiensGenome 3995.2 3329.87 2536.67 3512.02 2572.36 4010.61 3496.66 3265.55 3163.0
DESeq
batR. aegyptiacusTranscriptome 5236.76 5123.09 3947.79 4107.77 4102.11 5109.35 4881.13 4075.86 5026.2
DESeq
bat_genomeR. aegyptiacusGenome 5757.05 4403.7 4351.53 5838.0 4638.65 5679.84 5450.61 4369.13 5314.38

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 3995.2 3512.02 3496.66 -0.19 -0.19 -0.01
7h 3329.87 2572.36 3265.55 -0.37 -0.03 0.34
23h 2536.67 4010.61 3163.0 0.66 0.32 -0.34

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 3995.2 3329.87 2536.67 -0.26 -0.66 -0.39
Ebov 3512.02 2572.36 4010.61 -0.45 0.19 0.64
Marv 3496.66 3265.55 3163.0 -0.1 -0.14 -0.05

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 5236.76 4107.77 4881.13 -0.35 -0.1 0.25
7h 5123.09 4102.11 4075.86 -0.32 -0.33 -0.01
23h 3947.79 5109.35 5026.2 0.37 0.35 -0.02

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 5236.76 5123.09 3947.79 -0.03 -0.41 -0.38
Ebov 4107.77 4102.11 5109.35 -0.0 0.31 0.32
Marv 4881.13 4075.86 5026.2 -0.26 0.04 0.3