FAM63A

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
FAM63A FLJ11280 family with sequence similarity 63, member A NM_018379 pdf NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

This is a protein-coding gene and encodes the protein called homo sapiensfamily with sequence similarity 63, member A (FAM63A), transcript variant 5.An important paralog of this gene is FAM63B. Otherwise no information isavailable.

Low expression in human cells and no homolog found in bat cells.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome24 35 28 28 39 28 27 30 35
Read_Max
batR. aegyptiacusTranscriptome 15 7 15 11 6 7 5 17 10
Read_Max
bat_genomeR. aegyptiacusGenome 36 38 24 32 22 30 19 61 56
DESeq
humanH. sapiensGenome 404.89 578.25 585.77 452.71 507.47 310.24 431.71 485.41 588.17
DESeq
batR. aegyptiacusTranscriptome 40.49 44.57 73.07 66.93 52.47 54.89 29.92 64.62 63.98
DESeq
bat_genomeR. aegyptiacusGenome 321.41 487.37 502.1 394.01 421.9 526.08 326.11 469.42 559.95

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 404.89 452.71 431.71 0.16 0.09 -0.07
7h 578.25 507.47 485.41 -0.19 -0.25 -0.06
23h 585.77 310.24 588.17 -0.92 0.01 0.92

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 404.89 578.25 585.77 0.51 0.53 0.02
Ebov 452.71 507.47 310.24 0.16 -0.55 -0.71
Marv 431.71 485.41 588.17 0.17 0.45 0.28

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 40.49 66.93 29.92 0.73 -0.44 -1.16
7h 44.57 52.47 64.62 0.24 0.54 0.3
23h 73.07 54.89 63.98 -0.41 -0.19 0.22

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 40.49 44.57 73.07 0.14 0.85 0.71
Ebov 66.93 52.47 54.89 -0.35 -0.29 0.07
Marv 29.92 64.62 63.98 1.11 1.1 -0.01