GLMN

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
GLMN FAP48, FKBPAP, GLML, GVM, VMGLOM glomulin, FKBP associated protein NM_007070 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

This gene encodes a phosphorylated protein that is a member of aSkp1-Cullin-F-box-like complex. The protein is essential for normaldevelopment of the vasculature and mutations in this gene have beenassociated with glomuvenous malformations, also called glomangiomas.Alternatively spliced variants that encode different protein isoforms havebeen described but the full-length nature of only one has been determined.

Low expression in human cells but not expressed in bat cells.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome54 74 71 83 118 50 82 82 46
Read_Max
batR. aegyptiacusTranscriptome 113 99 86 121 138 68 115 150 122
Read_Max
bat_genomeR. aegyptiacusGenome 127 133 75 107 117 44 102 184 131
DESeq
humanH. sapiensGenome 738.75 666.98 1121.9 739.02 1015.56 570.79 715.92 685.24 974.18
DESeq
batR. aegyptiacusTranscriptome 830.22 752.57 650.86 918.5 957.01 601.53 994.38 922.22 812.73
DESeq
bat_genomeR. aegyptiacusGenome 1413.7 1509.58 1159.29 1196.83 1381.77 932.06 1549.61 1604.13 1249.18

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 738.75 739.02 715.92 0.0 -0.05 -0.05
7h 666.98 1015.56 685.24 0.61 0.04 -0.57
23h 1121.9 570.79 974.18 -0.97 -0.2 0.77

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 738.75 666.98 1121.9 -0.15 0.6 0.75
Ebov 739.02 1015.56 570.79 0.46 -0.37 -0.83
Marv 715.92 685.24 974.18 -0.06 0.44 0.51

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 830.22 918.5 994.38 0.15 0.26 0.11
7h 752.57 957.01 922.22 0.35 0.29 -0.05
23h 650.86 601.53 812.73 -0.11 0.32 0.43

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 830.22 752.57 650.86 -0.14 -0.35 -0.21
Ebov 918.5 957.01 601.53 0.06 -0.61 -0.67
Marv 994.38 922.22 812.73 -0.11 -0.29 -0.18