VEGFC

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
VEGFC Flt4-L, LMPH1D, VRP,VRP vascular endothelial growth factor C NM_005429 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The ascular endothelial growth factor C gene is involved in the Ras, PI3K-Akt, TNF and Rap1 signaling pathways. Cytokine-cytokine receptor interaction, Focal adhesion and Pathways in cancer.

It does not present particularly interesting differential expression pattern in the analyzed samples.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome27 19 13 12 13 13 23 20 18
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome 0 0 0 0 0 0 0 0 0
DESeq
humanH. sapiensGenome 1.0 1.0 4.97 1.0 5.88 1.0 1.0 1.0 3.17
DESeq
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
DESeq
bat_genomeR. aegyptiacusGenome 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1.0 1.0 1.0 0.0 0.0 0.0
7h 1.0 5.88 1.0 2.56 0.0 -2.56
23h 4.97 1.0 3.17 -2.31 -0.65 1.66

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1.0 1.0 4.97 0.0 2.31 2.31
Ebov 1.0 5.88 1.0 2.56 0.0 -2.56
Marv 1.0 1.0 3.17 0.0 1.66 1.66

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h NA NA NA NA NA NA
7h NA NA NA NA NA NA
23h NA NA NA NA NA NA

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock NA NA NA NA NA NA
Ebov NA NA NA NA NA NA
Marv NA NA NA NA NA NA