RAP1B
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| RAP1B | RAP1B, K-REV, RAL1B,K-REV, DKFZp586H0723 | RAP1B, member of RAS oncogene family | NM_001010942 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene encodes a member of the RAS-like small GTP-binding protein superfamily. Members of this family regulate multiple cellular processes including cell adhesion and growth and differentiation. This protein localizes to cellular membranes and has been shown to regulate integrin-mediated cell signaling. This protein also plays a role in regulating outside-in signaling in platelets. Alternate splicing results in multiple transcript variants.
No pronounced modulation seen in bat cells or human cells cell lines.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 350 | 290 | 304 | 284 | 386 | 559 | 360 | 385 | 239 |
Read_Max |  | R. aegyptiacus | Transcriptome | 737 | 538 | 357 | 417 | 440 | 700 | 531 | 630 | 689 |
Read_Max |  | R. aegyptiacus | Genome | 888 | 584 | 358 | 598 | 486 | 463 | 593 | 975 | 862 |
DESeq | | H. sapiens | Genome | 1378.07 | 1094.3 | 1374.08 | 1348.15 | 1276.52 | 2220.96 | 1256.28 | 1104.1 | 1254.71 |
DESeq | | R. aegyptiacus | Transcriptome | 1026.81 | 827.0 | 776.68 | 702.4 | 842.03 | 1252.1 | 1055.56 | 930.48 | 1034.03 |
DESeq | | R. aegyptiacus | Genome | 4671.64 | 3857.01 | 3246.91 | 4533.54 | 4453.37 | 5632.84 | 5611.42 | 4287.46 | 4422.23 |