NLK

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
NLK		nemo-like kinase	NM_016231	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens nemo-like kinase (NLK), mRNA.

The gene is moderately upregulated in human cells Ebola 7 h. The bat cells homolog is expressed uniformly.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	128	119	134	104	163	122	136	187	170
Read_Max		R. aegyptiacus	Transcriptome	162	117	76	129	108	176	140	154	188
Read_Max		R. aegyptiacus	Genome	152	125	82	109	79	93	107	160	211
DESeq		H. sapiens	Genome	2093.49	1816.37	2048.2	1796.44	1823.64	1643.27	1808.04	1919.44	3041.22
DESeq		R. aegyptiacus	Transcriptome	1075.54	1024.87	835.31	974.36	1000.82	1193.08	1351.46	1023.02	1088.26
DESeq		R. aegyptiacus	Genome	2661.53	2365.68	2480.37	2416.37	2270.22	3170.84	3055.35	2427.21	3055.75

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	2093.49	1796.44	1808.04	-0.22	-0.21	0.01
7h	1816.37	1823.64	1919.44	0.01	0.08	0.07
23h	2048.2	1643.27	3041.22	-0.32	0.57	0.89

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	2093.49	1816.37	2048.2	-0.2	-0.03	0.17
Ebov	1796.44	1823.64	1643.27	0.02	-0.13	-0.15
Marv	1808.04	1919.44	3041.22	0.09	0.75	0.66

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1075.54	974.36	1351.46	-0.14	0.33	0.47
7h	1024.87	1000.82	1023.02	-0.03	-0.0	0.03
23h	835.31	1193.08	1088.26	0.51	0.38	-0.13

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1075.54	1024.87	835.31	-0.07	-0.36	-0.3
Ebov	974.36	1000.82	1193.08	0.04	0.29	0.25
Marv	1351.46	1023.02	1088.26	-0.4	-0.31	0.09