NTRK1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
NTRK1 MTC, TRK, TRK1, TRKA, Trk-A, p140-TrkA,TRK, MTC neurotrophic tyrosine kinase, receptor, type 1 NM_002529 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The neurotrophic tyrosine kinase, receptor, type 1 (EC:2.7.10.1) is involved in the MAPK and Neurotrophin signaling pathways, Endocytosis, Apoptosis, Inflammatory mediator regulation of TRP channels, Pathways in cancer, Transcriptional misregulation in cancer, Thyroid cancer, central carbon metabolism in cancer.

No expression was observed in the samples analyzed.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome3 2 2 0 2 2 2 1 2
Read_Max
batR. aegyptiacusTranscriptome NA 5 2 2 2 NA 2 NA 2
Read_Max
bat_genomeR. aegyptiacusGenome 5 3 2 6 4 5 2 4 2
DESeq
humanH. sapiensGenome 3.03 6.1 2.99 1.0 2.63 1.0 7.14 1.0 4.26
DESeq
batR. aegyptiacusTranscriptome 1.0 6.45 3.44 2.83 4.29 1.0 4.34 1.0 5.37
DESeq
bat_genomeR. aegyptiacusGenome 11.17 13.69 12.27 25.67 17.86 31.33 11.25 15.86 11.13

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 3.03 1.0 7.14 -1.6 1.24 2.84
7h 6.1 2.63 1.0 -1.21 -2.61 -1.4
23h 2.99 1.0 4.26 -1.58 0.51 2.09

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 3.03 6.1 2.99 1.01 -0.02 -1.03
Ebov 1.0 2.63 1.0 1.4 0.0 -1.4
Marv 7.14 1.0 4.26 -2.84 -0.75 2.09

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 1.0 2.83 4.34 1.5 2.12 0.62
7h 6.45 4.29 1.0 -0.59 -2.69 -2.1
23h 3.44 1.0 5.37 -1.78 0.64 2.42

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 1.0 6.45 3.44 2.69 1.78 -0.91
Ebov 2.83 4.29 1.0 0.6 -1.5 -2.1
Marv 4.34 1.0 5.37 -2.12 0.31 2.42