GIT1

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
GIT1	NM_001085454, NP_001078923, Q9Y2X7-3	G protein-coupled receptor kinase interacting ArfGAP 1	NM_014030	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The GIT1 is a G protein-coupled receptor kinase.

This gene is slightly upregulated in bat cells after Ebola an Marburg infection.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	92	102	93	96	112	161	106	172	94
Read_Max		R. aegyptiacus	Transcriptome	195	142	142	137	137	282	148	157	217
Read_Max		R. aegyptiacus	Genome	219	159	126	139	119	166	130	214	249
DESeq		H. sapiens	Genome	1622.63	1726.62	1382.02	1599.1	1376.51	2119.63	1587.86	1813.93	1659.2
DESeq		R. aegyptiacus	Transcriptome	1858.55	1859.95	1898.05	1831.42	1985.3	2962.58	1906.55	1788.92	2354.84
DESeq		R. aegyptiacus	Genome	2334.96	2289.01	2279.53	2537.83	2523.58	3512.86	2414.37	2220.25	2857.97

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1622.63	1599.1	1587.86	-0.02	-0.03	-0.01
7h	1726.62	1376.51	1813.93	-0.33	0.07	0.4
23h	1382.02	2119.63	1659.2	0.62	0.26	-0.35

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1622.63	1726.62	1382.02	0.09	-0.23	-0.32
Ebov	1599.1	1376.51	2119.63	-0.22	0.41	0.62
Marv	1587.86	1813.93	1659.2	0.19	0.06	-0.13

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1858.55	1831.42	1906.55	-0.02	0.04	0.06
7h	1859.95	1985.3	1788.92	0.09	-0.06	-0.15
23h	1898.05	2962.58	2354.84	0.64	0.31	-0.33

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1858.55	1859.95	1898.05	0.0	0.03	0.03
Ebov	1831.42	1985.3	2962.58	0.12	0.69	0.58
Marv	1906.55	1788.92	2354.84	-0.09	0.3	0.4