SH3GLB1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
SH3GLB1 SH3-Domain GRB2-Like Endophilin B1, VPS45A, PPP1R70, dJ612B15.2,CGI-61, KIAA0491, Bif-1 SH3-domain GRB2-like endophilin B1 NM_016009 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

This gene encodes a SRC homology 3 domain-containing protein. The encodedprotein interacts with the proapoptotic member of the Bcl-2 family,Bcl-2-associated X protein (Bax) and may be involved in regulating apoptoticsignaling pathways. This protein may also be involved in maintainingmitochondrial morphology. Alternate splicing results in multiple transcriptvariants.

Expression in all samples.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome239 253 279 257 338 533 291 346 306
Read_Max
batR. aegyptiacusTranscriptome 668 583 531 595 426 725 622 711 774
Read_Max
bat_genomeR. aegyptiacusGenome 762 639 446 572 372 437 548 855 891
DESeq
humanH. sapiensGenome 3446.2 3493.04 3826.35 3543.96 3416.21 5083.09 3514.21 3239.17 4817.95
DESeq
batR. aegyptiacusTranscriptome 2873.44 2608.79 2573.56 2636.29 2677.4 3356.52 3056.78 2812.59 2851.68
DESeq
bat_genomeR. aegyptiacusGenome 5970.18 5689.68 5169.4 5615.82 5770.41 7449.97 6575.14 5744.89 5922.28

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 3446.2 3543.96 3514.21 0.04 0.03 -0.01
7h 3493.04 3416.21 3239.17 -0.03 -0.11 -0.08
23h 3826.35 5083.09 4817.95 0.41 0.33 -0.08

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 3446.2 3493.04 3826.35 0.02 0.15 0.13
Ebov 3543.96 3416.21 5083.09 -0.05 0.52 0.57
Marv 3514.21 3239.17 4817.95 -0.12 0.46 0.57

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2873.44 2636.29 3056.78 -0.12 0.09 0.21
7h 2608.79 2677.4 2812.59 0.04 0.11 0.07
23h 2573.56 3356.52 2851.68 0.38 0.15 -0.24

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2873.44 2608.79 2573.56 -0.14 -0.16 -0.02
Ebov 2636.29 2677.4 3356.52 0.02 0.35 0.33
Marv 3056.78 2812.59 2851.68 -0.12 -0.1 0.02