RAB11FIP1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| RAB11FIP1 | NOEL1A, RCP, rab11-FIP1,RCP, FLJ22622, FLJ22524, Rab11-FIP1 | RAB11 family interacting protein 1 (class I) | NM_025151 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene encodes one of the Rab11-family interacting proteins (Rab11-FIPs), which play a role in the Rab-11 mediated recycling of vesicles. The encoded protein may be involved in endocytic sorting, trafficking of proteins including integrin subunits and epidermal growth factor receptor (EGFR), and transport between the recycling endosome and the trans-Golgi network. Alternative splicing results in multiple transcript variants.
The gene is downregulated in human cells Ebola infected cells after 23 h. No homolog in bat cells was found.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 248 | 171 | 257 | 234 | 309 | 211 | 251 | 293 | 291 |
Read_Max |  | R. aegyptiacus | Transcriptome | 56 | 52 | 22 | 40 | 38 | 24 | 30 | 48 | 56 |
Read_Max |  | R. aegyptiacus | Genome | 62 | 43 | 21 | 54 | 30 | 12 | 31 | 59 | 63 |
DESeq | | H. sapiens | Genome | 6530.14 | 4181.46 | 5041.57 | 5239.02 | 4865.7 | 4165.89 | 5213.35 | 4175.21 | 7438.45 |
DESeq | | R. aegyptiacus | Transcriptome | 547.93 | 489.34 | 515.27 | 523.85 | 521.17 | 293.57 | 567.21 | 593.39 | 677.15 |
DESeq | | R. aegyptiacus | Genome | 813.84 | 731.06 | 681.74 | 732.71 | 765.67 | 480.39 | 774.8 | 827.04 | 931.54 |