EIF3B

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
EIF3B	PRT1, eIF3b	eukaryotic translation initiation factor 3, subunit B		pdf		NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens eukaryotic translation initiation factor 3, subunit B (EIF3B), transcript variant 2, mRNA

The gene is equally strong expressed in all human cells samples. There is a good homolog hit in the bat cells transcriptome with slightly downregulation in the Ebola 7 h sample.

Show legend

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source	Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max	H. sapiens	Genome	1038	1298	1171	1232	1584	2031	1482	1721	1161
Read_Max	R. aegyptiacus	Transcriptome	496	346	212	293	286	330	416	366	339
Read_Max	R. aegyptiacus	Genome	1335	723	463	1072	564	515	618	982	1078
DESeq	H. sapiens	Genome	13979.69	15096.14	13869.77	15464.1	13894.33	22521.69	15793.32	16673.85	14345.28
DESeq	R. aegyptiacus	Transcriptome	2696.17	2400.02	1657.4	1916.58	2326.97	2610.99	2956.66	2085.52	2166.78
DESeq	R. aegyptiacus	Genome	11151.45	8555.51	6863.15	11357.05	9973.77	10610.37	11337.53	8725.58	8870.15

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	13979.69	15464.1	15793.32	0.15	0.18	0.03
7h	15096.14	13894.33	16673.85	-0.12	0.14	0.26
23h	13869.77	22521.69	14345.28	0.7	0.05	-0.65

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	13979.69	15096.14	13869.77	0.11	-0.01	-0.12
Ebov	15464.1	13894.33	22521.69	-0.15	0.54	0.7
Marv	15793.32	16673.85	14345.28	0.08	-0.14	-0.22

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	2696.17	1916.58	2956.66	-0.49	0.13	0.63
7h	2400.02	2326.97	2085.52	-0.04	-0.2	-0.16
23h	1657.4	2610.99	2166.78	0.66	0.39	-0.27

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	2696.17	2400.02	1657.4	-0.17	-0.7	-0.53
Ebov	1916.58	2326.97	2610.99	0.28	0.45	0.17
Marv	2956.66	2085.52	2166.78	-0.5	-0.45	0.06

Differential transcriptional responses to Ebola and Marburg virus infection in cells from bats and humans

Supplemental Material