EHD4

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
EHD4	PAST4	EH-domain containing 4	NM_139265	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The EH-domain containing 4 is involved in endocytosis. It seems to be slightly upregulated after 23 hours of Marburg virus infection in bats.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	132	124	90	135	158	310	162	201	144
Read_Max		R. aegyptiacus	Transcriptome	168	146	106	142	120	156	111	157	259
Read_Max		R. aegyptiacus	Genome	175	141	92	143	99	93	97	184	292
DESeq		H. sapiens	Genome	1807.32	1700.11	1276.78	2004.04	1636.66	3943.5	1881.73	2039.34	2148.51
DESeq		R. aegyptiacus	Transcriptome	1018.41	1075.7	732.7	893.78	888.02	837.63	756.32	865.21	1285.95
DESeq		R. aegyptiacus	Genome	1979.18	1703.98	1569.9	2156.66	1823.76	1935.92	1744.15	1739.72	2538.61

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1807.32	2004.04	1881.73	0.15	0.06	-0.09
7h	1700.11	1636.66	2039.34	-0.05	0.26	0.32
23h	1276.78	3943.5	2148.51	1.63	0.75	-0.88

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1807.32	1700.11	1276.78	-0.09	-0.5	-0.41
Ebov	2004.04	1636.66	3943.5	-0.29	0.98	1.27
Marv	1881.73	2039.34	2148.51	0.12	0.19	0.08

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1018.41	893.78	756.32	-0.19	-0.43	-0.24
7h	1075.7	888.02	865.21	-0.28	-0.31	-0.04
23h	732.7	837.63	1285.95	0.19	0.81	0.62

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1018.41	1075.7	732.7	0.08	-0.48	-0.55
Ebov	893.78	888.02	837.63	-0.01	-0.09	-0.08
Marv	756.32	865.21	1285.95	0.19	0.77	0.57