ARF5

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
ARF5 ADP-Ribosylation Factor 5 ADP-ribosylation factor 5 NM_001662 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The protein encoded by this gene is a peripheral membrane protein. It is sensitive to brefeldin A. This encoded protein contains a GRIP domain which is thought to be used in targeting. It may play a role in the organization of trans-Golgi network subcompartment involved with membrane transport. Expression in all samples.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome122 150 149 151 206 195 166 197 140
Read_Max
batR. aegyptiacusTranscriptome 46 55 37 56 49 41 69 48 89
Read_Max
bat_genomeR. aegyptiacusGenome 56 58 26 56 40 24 49 54 97
DESeq
humanH. sapiensGenome 660.61 764.88 684.06 880.47 738.35 618.17 782.59 698.83 746.92
DESeq
batR. aegyptiacusTranscriptome 166.51 172.55 174.46 176.81 187.17 160.11 272.43 166.24 259.91
DESeq
bat_genomeR. aegyptiacusGenome 210.55 189.84 165.14 205.4 205.37 201.03 259.77 185.55 299.67

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 660.61 880.47 782.59 0.41 0.24 -0.17
7h 764.88 738.35 698.83 -0.05 -0.13 -0.08
23h 684.06 618.17 746.92 -0.15 0.13 0.27

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 660.61 764.88 684.06 0.21 0.05 -0.16
Ebov 880.47 738.35 618.17 -0.25 -0.51 -0.26
Marv 782.59 698.83 746.92 -0.16 -0.07 0.1

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 166.51 176.81 272.43 0.09 0.71 0.62
7h 172.55 187.17 166.24 0.12 -0.05 -0.17
23h 174.46 160.11 259.91 -0.12 0.58 0.7

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 166.51 172.55 174.46 0.05 0.07 0.02
Ebov 176.81 187.17 160.11 0.08 -0.14 -0.23
Marv 272.43 166.24 259.91 -0.71 -0.07 0.64