CHMP7

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
CHMP7	Charged Multivesicular Body Protein 7,MGC29816	charged multivesicular body protein 7	NM_152272	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

Homo sapiens charged multivesicular body protein 7 (CHMP7), mRNA. Expressed in all samples, some variation in expression level.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	174	199	143	170	222	203	223	309	176
Read_Max		R. aegyptiacus	Transcriptome	129	132	129	134	108	125	91	140	157
Read_Max		R. aegyptiacus	Genome	169	150	113	168	112	93	101	217	235
DESeq		H. sapiens	Genome	1534.34	1790.88	1591.51	1536.36	1786.24	1839.34	1731.73	1908.25	1782.07
DESeq		R. aegyptiacus	Transcriptome	918.43	991.29	1007.55	1056.77	1142.08	1046.79	823.07	1047.81	1068.14
DESeq		R. aegyptiacus	Genome	1536.59	1675.69	1553.16	1745.87	1852.78	1807.99	1415.79	1677.08	1703.82

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	1534.34	1536.36	1731.73	0.0	0.17	0.17
7h	1790.88	1786.24	1908.25	-0.0	0.09	0.1
23h	1591.51	1839.34	1782.07	0.21	0.16	-0.05

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	1534.34	1790.88	1591.51	0.22	0.05	-0.17
Ebov	1536.36	1786.24	1839.34	0.22	0.26	0.04
Marv	1731.73	1908.25	1782.07	0.14	0.04	-0.1

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	918.43	1056.77	823.07	0.2	-0.16	-0.36
7h	991.29	1142.08	1047.81	0.2	0.08	-0.12
23h	1007.55	1046.79	1068.14	0.06	0.08	0.03

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	918.43	991.29	1007.55	0.11	0.13	0.02
Ebov	1056.77	1142.08	1046.79	0.11	-0.01	-0.13
Marv	823.07	1047.81	1068.14	0.35	0.38	0.03