TSC1
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| TSC1 | KIAA0243, LAM, hamartin | tuberous sclerosis 1 |  |
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Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
This gene encodes a growth inhibitory protein thought to play a role in the stabilization of tuberin. Mutations in this gene have been associated with tuberous sclerosis. Alternative splicing results in multiple transcript variants.
This gene was expressed in all probes. A slight upregulation was observed in he Ebola and Marburg infected 23h probes in Human.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 147 | 162 | 109 | 146 | 175 | 281 | 189 | 174 | 147 |
Read_Max |  | R. aegyptiacus | Transcriptome | 82 | 83 | 67 | 74 | 65 | 112 | 54 | 91 | 84 |
Read_Max |  | R. aegyptiacus | Genome | 97 | 82 | 58 | 89 | 57 | 74 | 49 | 111 | 119 |
DESeq | | H. sapiens | Genome | 3409.67 | 3542.0 | 3609.92 | 3523.43 | 3920.24 | 7397.8 | 3294.9 | 3295.12 | 4408.02 |
DESeq | | R. aegyptiacus | Transcriptome | 1346.06 | 1382.5 | 1312.93 | 1276.53 | 1314.01 | 1735.86 | 1057.79 | 1270.06 | 1257.08 |
DESeq | | R. aegyptiacus | Genome | 2670.98 | 2579.25 | 2437.97 | 2812.35 | 2669.79 | 3870.54 | 2505.46 | 2552.49 | 2614.81 |