PARD6G

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
PARD6G PAR-6G, PAR6gamma par-6 family cell polarity regulator gamma NM_032510 pdf NONE

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The gene PARD6G is weakly expressed in humand and moderatly expressed in bat datasets without significant changes in expression profiles. PARD6G (par-6 family cell polarity regulator gamma) is a protein-coding gene. An important paralog of this gene is PARD6B.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome31 16 23 24 22 24 23 29 24
Read_Max
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
Read_Max
bat_genomeR. aegyptiacusGenome 176 165 143 129 121 130 129 237 229
DESeq
humanH. sapiensGenome 308.48 240.67 358.42 308.98 290.41 407.62 293.99 268.78 363.09
DESeq
batR. aegyptiacusTranscriptome NA NA NA NA NA NA NA NA NA
DESeq
bat_genomeR. aegyptiacusGenome 1169.63 1455.73 1391.37 1125.73 1373.96 1412.45 1159.39 1177.52 1211.51

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 308.48 308.98 293.99 0.0 -0.07 -0.07
7h 240.67 290.41 268.78 0.27 0.16 -0.11
23h 358.42 407.62 363.09 0.19 0.02 -0.17

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 308.48 240.67 358.42 -0.36 0.22 0.57
Ebov 308.98 290.41 407.62 -0.09 0.4 0.49
Marv 293.99 268.78 363.09 -0.13 0.3 0.43

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h NA NA NA NA NA NA
7h NA NA NA NA NA NA
23h NA NA NA NA NA NA

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock NA NA NA NA NA NA
Ebov NA NA NA NA NA NA
Marv NA NA NA NA NA NA