HSP90AA1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
HSP90AA1 EL52, HSP86, HSP89A, HSP90A, HSP90N, HSPC1, HSPCA, HSPCAL1, HSPCAL4, HSPN, Hsp89, Hsp90, LAP-2, LAP2,Hsp89, FLJ31884 heat shock protein 90kDa alpha (cytosolic), class A member 1 NM_005348 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The heat shock protein 90kDa alpha (cytosolic), class A member 1 is involved in Protein processing in endoplasmic reticulum, Antigen processing and presentation, PI3K-Akt and NOD-like receptor signaling pathways, Progesterone-mediated oocyte maturation, Estrogen signaling pathway, Pathways in cancer, Prostate cancer. It does not seems particularly differentially expressed in the analyzed samples.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome11607 11935 15933 9471 19949 22952 12177 15028 12624
Read_Max
batR. aegyptiacusTranscriptome 5920 5746 4121 7437 4812 8376 4198 7681 5568
Read_Max
bat_genomeR. aegyptiacusGenome 5965 6724 3296 4512 4216 3997 3229 8196 5074
DESeq
humanH. sapiensGenome 93822.1 91680.44 114958.18 83056.42 109268.9 134855.39 79603.83 84508.33 106799.12
DESeq
batR. aegyptiacusTranscriptome 42614.6 41930.82 42097.6 48659.61 44354.33 63583.93 39148.79 47434.46 40318.08
DESeq
bat_genomeR. aegyptiacusGenome 46118.31 56761.7 42061.47 47306.39 52571.02 74521.94 44944.17 52746.77 41601.5

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 93822.1 83056.42 79603.83 -0.18 -0.24 -0.06
7h 91680.44 109268.9 84508.33 0.25 -0.12 -0.37
23h 114958.18 134855.39 106799.12 0.23 -0.11 -0.34

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 93822.1 91680.44 114958.18 -0.03 0.29 0.33
Ebov 83056.42 109268.9 134855.39 0.4 0.7 0.3
Marv 79603.83 84508.33 106799.12 0.09 0.42 0.34

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 42614.6 48659.61 39148.79 0.19 -0.12 -0.31
7h 41930.82 44354.33 47434.46 0.08 0.18 0.1
23h 42097.6 63583.93 40318.08 0.59 -0.06 -0.66

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 42614.6 41930.82 42097.6 -0.02 -0.02 0.01
Ebov 48659.61 44354.33 63583.93 -0.13 0.39 0.52
Marv 39148.79 47434.46 40318.08 0.28 0.04 -0.23