SPIRE2

Name	Synonyms	Full Name	RefSeq ID	Description (.pdf)	IGV-img (human_genome)	Sashimi-img (human_genome)	UCSC-img (human_genome)	IGV-img (bat_genome)
SPIRE2	SPIR23,spir-2, KIAA1832	spire-type actin nucleation factor 2	XM_047462	pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The gene SPIRE2 is weakly expressed in human and bat datasets. SPIRE2 (spire-type actin nucleation factor 2) is a protein-coding gene. GO annotations related to this gene include actin binding. An important paralog of this gene is SPIRE1.

Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source		Species	Mapping on	Mock_3h	Mock_7h	Mock_23h	EBOV_3h	EBOV_7h	EBOV_23h	MARV_3h	MARV_7h	MARV_23h
Read_Max		H. sapiens	Genome	36	58	53	41	52	104	51	54	46
Read_Max		R. aegyptiacus	Transcriptome	5	2	5	2	2	1	3	3	7
Read_Max		R. aegyptiacus	Genome	19	13	9	18	6	7	10	19	15
DESeq		H. sapiens	Genome	947.8	976.0	1321.46	814.31	1004.18	1955.14	855.4	1093.71	1198.17
DESeq		R. aegyptiacus	Transcriptome	11.92	6.45	10.77	5.58	5.38	2.28	7.67	5.96	17.62
DESeq		R. aegyptiacus	Genome	154.69	160.63	174.06	174.78	123.89	101.82	172.05	162.55	214.9

Human Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	947.8	814.31	855.4	-0.22	-0.15	0.07
7h	976.0	1004.18	1093.71	0.04	0.16	0.12
23h	1321.46	1955.14	1198.17	0.57	-0.14	-0.71

Human Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	947.8	976.0	1321.46	0.04	0.48	0.44
Ebov	814.31	1004.18	1955.14	0.3	1.26	0.96
Marv	855.4	1093.71	1198.17	0.35	0.49	0.13

Bat Condition Comparisons

	Mock	EBOV	MARV	FC_{Mock_EBOV}	FC_{Mock_MARV}	FC_{EBOV_MARV}
3h	11.92	5.58	7.67	-1.1	-0.64	0.46
7h	6.45	5.38	5.96	-0.26	-0.11	0.15
23h	10.77	2.28	17.62	-2.24	0.71	2.95

Bat Time Point Comparisons

	3h	7h	23h	FC_{3h_7h}	FC_{3h_23h}	FC_{7h_23h}
Mock	11.92	6.45	10.77	-0.89	-0.15	0.74
Ebov	5.58	5.38	2.28	-0.05	-1.29	-1.24
Marv	7.67	5.96	17.62	-0.36	1.2	1.56