ITGA10
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| ITGA10 | ITGA10, PRO827 | integrin, alpha 10 | NM_003637 |  |
NONE |  |
 |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
Integrins are integral membrane proteins composed of an alpha chain and a beta chain, and are known to participate in cell adhesion as well as cell-surface mediated signalling. The I-domain containing alpha 10 combines with the integrin beta 1 chain (ITGB1) to form a novel collagen type II-binding integrin expressed in cartilage tissue.
ITGA10 is not expressed in humans nor in bats in examined conditions.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 2 | 4 | 2 | 4 | 3 | 6 | 2 | 4 | 3 |
Read_Max |  | R. aegyptiacus | Transcriptome | 5 | 5 | 2 | 3 | 3 | 4 | 2 | 5 | 6 |
Read_Max |  | R. aegyptiacus | Genome | 28 | 31 | 20 | 26 | 22 | 18 | 23 | 39 | 69 |
DESeq | | H. sapiens | Genome | 4.04 | 22.42 | 17.88 | 24.95 | 23.76 | 68.11 | 6.26 | 19.39 | 24.92 |
DESeq | | R. aegyptiacus | Transcriptome | 17.8 | 24.6 | 5.89 | 8.33 | 10.86 | 4.85 | 9.9 | 18.35 | 18.49 |
DESeq | | R. aegyptiacus | Genome | 166.72 | 190.75 | 200.84 | 208.36 | 176.35 | 184.06 | 170.93 | 200.62 | 307.37 |