CUL1

NameSynonymsFull NameRefSeq IDDescription (.pdf)IGV-img (humangenome)Sashimi-img (humangenome)UCSC-img (humangenome)IGV-img (batgenome)
CUL1 cullin 1 NM_003592 pdf

Download all snapshots for IGV, UCSC and Sashimi (zip archive)

Description

The cullin 1 gene is involved in the Cell cycle, Oocyte meiosis, Ubiquitin mediated proteolysis, Protein processing in endoplasmic reticulum, Wnt and TGF-beta signaling pathways, Circadian rhythm and Herpes simplex infection. It did not present a particularly interesting differential expression pattern in the samples analyzed.

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Maximum read counts and DESeq normalized read counts for human and bat cell lines

Source Species Mapping on Mock3h Mock7h Mock23h EBOV3h EBOV7h EBOV23h MARV3h MARV7h MARV23h
Read_Max
humanH. sapiensGenome493 503 350 487 534 491 496 637 329
Read_Max
batR. aegyptiacusTranscriptome 331 331 187 377 308 300 245 442 301
Read_Max
bat_genomeR. aegyptiacusGenome 382 397 212 326 267 179 214 549 403
DESeq
humanH. sapiensGenome 4161.63 4505.78 4562.04 4580.84 4974.63 6166.1 4524.75 4336.68 4609.18
DESeq
batR. aegyptiacusTranscriptome 2833.11 2937.38 2192.44 2946.7 2946.79 2764.97 2796.48 3033.19 2672.36
DESeq
bat_genomeR. aegyptiacusGenome 3706.55 3730.14 2942.31 3974.62 3857.36 3653.84 3596.25 3826.76 3447.88

Human Condition Comparisons

human Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 4161.63 4580.84 4524.75 0.14 0.12 -0.02
7h 4505.78 4974.63 4336.68 0.14 -0.06 -0.2
23h 4562.04 6166.1 4609.18 0.43 0.01 -0.42

Human Time Point Comparisons

human 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 4161.63 4505.78 4562.04 0.11 0.13 0.02
Ebov 4580.84 4974.63 6166.1 0.12 0.43 0.31
Marv 4524.75 4336.68 4609.18 -0.06 0.03 0.09

Bat Condition Comparisons

bat Mock EBOV MARV FCMock_EBOV FCMock_MARV FCEBOV_MARV
3h 2833.11 2946.7 2796.48 0.06 -0.02 -0.08
7h 2937.38 2946.79 3033.19 0.0 0.05 0.04
23h 2192.44 2764.97 2672.36 0.33 0.29 -0.05

Bat Time Point Comparisons

bat 3h 7h 23h FC3h_7h FC3h_23h FC7h_23h
Mock 2833.11 2937.38 2192.44 0.05 -0.37 -0.42
Ebov 2946.7 2946.79 2764.97 0.0 -0.09 -0.09
Marv 2796.48 3033.19 2672.36 0.12 -0.07 -0.18