SOCS4
| Name | Synonyms | Full Name | RefSeq ID | Description (.pdf) | IGV-img (humangenome) | Sashimi-img (humangenome) | UCSC-img (humangenome) | IGV-img (batgenome) |
|---|---|---|---|---|---|---|---|---|
| SOCS4 | NM_080867, NP_955453, Q8WXH5, SOCS4_HUMAN, SOCS7 | suppressor of cytokine signaling 4 |  |
 |
 |
 |
Download all snapshots for IGV, UCSC and Sashimi (zip archive)
Description
he protein encoded by this gene contains a SH2 domain and a SOCS BOX domain. The protein thus belongs to the suppressor of cytokine signaling (SOCS), also known as STAT-induced STAT inhibitor (SSI), protein family. SOCS family members are known to be cytokine-inducible negative regulators of cytokine signaling. Two alternatively spliced transcript variants encoding the same protein have been found for this gene.
There were no significant expression changes within these well-expressed gene.
Maximum read counts and DESeq normalized read counts for human and bat cell lines
| Source | Species | Mapping on | Mock3h | Mock7h | Mock23h | EBOV3h | EBOV7h | EBOV23h | MARV3h | MARV7h | MARV23h | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Read_Max |  | H. sapiens | Genome | 171 | 151 | 196 | 119 | 189 | 180 | 197 | 193 | 175 |
Read_Max |  | R. aegyptiacus | Transcriptome | NA | NA | NA | NA | NA | NA | NA | NA | NA |
Read_Max |  | R. aegyptiacus | Genome | 257 | 150 | 137 | 146 | 113 | 151 | 178 | 262 | 234 |
DESeq | | H. sapiens | Genome | 3184.39 | 2813.81 | 3199.88 | 2396.43 | 2575.61 | 2824.97 | 2840.51 | 2474.19 | 3309.8 |
DESeq | | R. aegyptiacus | Transcriptome | NA | NA | NA | NA | NA | NA | NA | NA | NA |
DESeq | | R. aegyptiacus | Genome | 1690.42 | 1429.26 | 1184.96 | 1489.13 | 1333.78 | 1567.8 | 1885.84 | 1275.06 | 1196.96 |