198 entries « 1 of 4 »

2023

Meyer, Daria; Goettsch, Winfried; Spangenberg, Jannes; Bohn, Patrick; Stieber, Bettina; Krautwurst, Sebastian; zu Siederdissen, Christian Höner; Srivastava, Akash; Zarkovic, Milena; Wollny, Damian; Marz, Manja

Maximizing the potential of genomic and transcriptomic studies by nanopore sequencing Journal Article

In: bioRxiv, 2023.

Abstract | Links | BibTeX | Tags: DNA / genomics, nanopore, nucleic acid modifications

Triebel, Sandra; Lamkiewicz, Kevin; Ontiveros, Nancy; Sweeney, Blake; Stadler, Peter F.; Petrov, Anton I.; Niepmann, Michael; Marz, Manja

Comprehensive Survey of Conserved RNA Secondary Structures in Full-Genome Alignment of Hepatitis C Virus Journal Article

In: bioRxiv, 2023.

Abstract | Links | BibTeX | Tags: alignment, ncRNAs, phylogenetics, RNA structure, RNA-RNA interactions, virus host interaction, viruses

Klassert, Tilman E.; Hölzer, Martin; Zubiria-Barrera, Cristina; Bethge, Julia; Klaile, Esther; Müller, Mario M.; Marz, Manja; Slevogt, Hortense

Differential Transcriptional Responses of Human Granulocytes to Fungal Infection with Candida albicans and Aspergillus fumigatus Journal Article

In: J Fungi, vol. 9, iss. 10, pp. 1014, 2023.

Abstract | Links | BibTeX | Tags: differential expression analysis, fungi, RNA / transcriptomics

Safrastyan, Aram; Siederdissen, Christian Höner Zu; Wollny, Damian

Decoding cell-type contributions to the cfRNA transcriptomic landscape of liver cancer Journal Article

In: Hum Genomics, vol. 17, iss. 1, pp. 90, 2023.

Abstract | Links | BibTeX | Tags: cancer, ncRNAs

Hufsky, Franziska; Abecasis, Ana B.; Babaian, Artem; Beck, Sebastian; Brierley, Liam; Dellicour, Simon; Eggeling, Christian; Elena, Santiago F.; Gieraths, Udo; Ha, Anh D.; Harvey, Will; Jones, Terry C.; Lamkiewicz, Kevin; Lovate, Gabriel Lencioni; Lücking, Dominik; Machyna, Martin; Nishimura, Luca; Nocke, Maximilian K.; Renard, Bernard Y.; Sakaguchi, Shoichi; Sakellaridi, Lygeri; Spangenberg, Jannes; Tarradas-Alemany, Maria; Triebel, Sandra; Vakulenko, Yulia; Wijesekara, Rajitha Yasas; González-Candelas, Fernando; Krautwurst, Sarah; Pérez-Cataluña, Alba; Randazzo, Walter; Sánchez, Gloria; Marz, Manja

The International Virus Bioinformatics Meeting 2023 Journal Article

In: Viruses, vol. 15, iss. 10, 2023, ISSN: 1999-4915.

Abstract | Links | BibTeX | Tags: annotation, software, virus host interaction, viruses

Micheel, Julia; Aron, Franziska; Kelani, Abdulrahman A.; Girbardt, Christian; Blango, Matthew G.; Walther, Grit; Wollny, Damian

RNA-based sensitive fungal pathogen detection Journal Article

In: bioRxiv, 2023.

Abstract | Links | BibTeX | Tags: fungi, ncRNAs, RNA / transcriptomics

Safrastyan, Aram; Wollny, Damian

Detection of reproducible liver cancer specific ligand-receptor signaling in blood Journal Article

In: bioRxiv, 2023.

Abstract | Links | BibTeX | Tags: cancer, ncRNAs

Schoen, Andreas; Hölzer, Martin; Müller, Marcel A.; Wallerang, Kai B.; Drosten, Christian; Marz, Manja; Lamp, Benjamin; Weber, Friedemann

Functional comparisons of the virus sensor RIG-I from humans, the microbat Myotis daubentonii, and the megabat Rousettus aegyptiacus, and their response to SARS-CoV-2 infection Journal Article

In: Journal of Virology, vol. 0, iss. 0, pp. e00205-23, 2023.

Abstract | Links | BibTeX | Tags: DNA / genomics, viruses

Triebel, Sandra; Sachse, Konrad; Weber, Michael; Heller, Martin; Diezel, Celia; Hölzer, Martin; Schnee, Christiane; Marz, Manja

De novo genome assembly resolving repetitive structures enables genomic analysis of 35 European Mycoplasmopsis bovis strains Journal Article

In: BMC Genomics, vol. 24, iss. 1, no. 548, 2023, ISBN: 1471-2164.

Abstract | Links | BibTeX | Tags: assembly, bacteria, DNA / genomics, nanopore, phylogenetics

Ritsch, Muriel; Cassman, Noriko A.; Saghaei, Shahram; Marz, Manja

Navigating the Landscape: A Comprehensive Review of Current Virus Databases Journal Article

In: Viruses, vol. 15, iss. 9, no. 1834, 2023, ISBN: 1999-4915.

Abstract | Links | BibTeX | Tags: database, viruses

Rangel-Pineros, Guillermo; Almeida, Alexandre; Beracochea, Martin; Sakharova, Ekaterina; Marz, Manja; Muñoz, Alejandro Reyes; Hölzer, Martin; Finn, Robert D.

VIRify: An integrated detection, annotation and taxonomic classification pipeline using virus-specific protein profile hidden Markov models Journal Article

In: PLOS Comput Biol, vol. 19, iss. 8, pp. e1011422, 2023.

Abstract | Links | BibTeX | Tags: annotation, classification, metagenomics, phylogenetics, software, viruses

Förstner, Konrad U.; Becker, Anke; Blom, Jochen; Bork, Peer; Clavel, Thomas; Dieckmann, Marius; Goesmann, Alexander; Götz, Barbara; Gübitz, Thomas; Hufsky, Franziska; Jünemann, Sebastian; Körner, Marie-Louise; Marz, Manja; Rocha, Ulisses Nunes Da; Overmann, Jörg; Pühler, Alfred; Rebholz-Schuhmann, Dietrich; Sczyrba, Alexander; Stoye, Jens; Vandendorpe, Justine; Rossum, Thea Van; McHardy, Alice

NFDI4Microbiota – national research data infrastructure for microbiota research Journal Article

In: Research Ideas and Outcomes, vol. 9, pp. e110501, 2023.

Abstract | Links | BibTeX | Tags: bacteria, fungi, viruses

Santos, José Diogo Neves Dos; Vitorino, Inês Rosado; Kallscheuer, Nicolai; Srivastava, Akash; Krautwurst, Sebastian; Marz, Manja; Jogler, Christian; Lobo-da-Cunha, Alexandre; Catita, José; Gonçalves, Hugo; González, Ignacio; Reyes, Fernando; Lage, Olga Maria

Streptomyces marispadix sp. nov., isolated from marine beach sediment Journal Article

In: International Journal of Systematic and Evolutionary Microbiology, vol. 73, no. 7, 2023, ISBN: 1466-5034.

Abstract | Links | BibTeX | Tags: bacteria, phylogenetics

Jakob, Celia; Lovate, Gabriel Lencioni; Desirò, Daniel; Gießler, Lara; Smyth, Redmond Patrick; Marquet, Roland; Lamkiewicz, Kevin; Marz, Manja; Schwemmle, Martin; Bolte, Hardin

Sequential disruption of SPLASH-identified vRNA–vRNA interactions challenges their role in influenza A virus genome packaging Journal Article

In: Nucleic Acids Research, 2023, ISBN: 0305-1048.

Abstract | Links | BibTeX | Tags: RNA-RNA interactions, splash, viruses

Thomas, Christine; Methner, Ulrich; Marz, Manja; Linde, Jörg

Oxford nanopore technologies-a valuable tool to generate whole-genome sequencing data for in silico serotyping and the detection of genetic markers in Salmonella Journal Article

In: Frontiers in Veterinary Science, vol. 10, 2023, ISBN: 2297-1769.

Abstract | Links | BibTeX | Tags: bacteria, nanopore

Sachse, Konrad; Hölzer, Martin; Vorimore, Fabien; Barf, Lisa-Marie; Sachse, Carsten; Laroucau, Karine; Marz, Manja; Lamkiewicz, Kevin

Genomic analysis of 61 Chlamydia psittaci strains reveals extensive divergence associated with host preference Journal Article

In: BMC Genomics, vol. 24, iss. 1, pp. 288, 2023, ISBN: 1471-2164.

Abstract | Links | BibTeX | Tags: alignment, assembly, bacteria, DNA / genomics, phylogenetics

Ren, Sijia; Bai, Feng; Stanko, Clara; Ritsch, Muriel; Schenk, Tino; Barth, Emanuel; Pei, Xin-Hai; Bierhoff, Holger

PAPAS Suppresses Breast Carcinogenesis by Promoting Differentiation of Mammary Epithelial Cells Journal Article

In: Cell Reports, 2023.

Abstract | Links | BibTeX | Tags: cancer, ncRNAs, RNA structure

Lamkiewicz, Kevin; Barf, Lisa-Marie; Sachse, Konrad; Hölzer, Martin

Pangenome calculation beyond the species level using RIBAP: A comprehensive bacterial core genome annotation pipeline based on Roary and pairwise ILPs Journal Article

In: bioRxiv, 2023.

Abstract | Links | BibTeX | Tags: annotation, bacteria, DNA / genomics

Triebel, Sandra; Sachse, Konrad; Weber, Michael; Heller, Martin; Diezel, Celia; Hölzer, Martin; Schnee, Christiane; Marz, Manja

De novo genome assembly resolving repetitive structures enables genomic analysis of 35 European Mycoplasma bovis strains Journal Article

In: bioRxiv, 2023.

Abstract | Links | BibTeX | Tags: assembly, bacteria, DNA / genomics, nanopore, phylogenetics

Erkes, Annett; Grove, René P; Žarković, Milena; Krautwurst, Sebastian; Koebnik, Ralf; Morgan, Richard D; Wilson, Geoffrey G; Hölzer, Martin; Marz, Manja; Boch, Jens; Grau, Jan

Assembling highly repetitive Xanthomonas TALomes using Oxford Nanopore sequencing Journal Article

In: BMC Genomics, vol. 24, iss. 1, pp. 151, 2023.

Abstract | Links | BibTeX | Tags: assembly, DNA / genomics, nanopore

Spangenberg, Jannes; zu Siederdissen, Christian Höner; Žarković, Milena; Triebel, Sandra; Rose, Ruben; Christophersen, Christina Martínez; Paltzow, Lea; Hegab, Mohsen M.; Wansorra, Anna; Srivastava, Akash; Krumbholz, Andi; Marz, Manja

Magnipore: Prediction of differential single nucleotide changes in the Oxford Nanopore Technologies sequencing signal of SARS-CoV-2 samples Journal Article

In: bioRxiv, 2023.

Abstract | Links | BibTeX | Tags: coronavirus, nanopore, nucleic acid modifications, RNA / transcriptomics, software, viruses

Murrieta-Coxca, José M; Barth, Emanuel; Fuentes-Zacarias, Paulina; Gutiérrez-Samudio, Ruby N; Groten, Tanja; Gellhaus, Alexandra; Köninger, Angela; Marz, Manja; Markert, Udo R; Morales-Prieto, Diana M

Identification of altered miRNAs and their targets in placenta accreta Journal Article

In: Front Endocrinol, vol. 14, pp. 1021640, 2023.

Abstract | Links | BibTeX | Tags: ncRNAs, pregnancy, RNA / transcriptomics

Lamkiewicz, Kevin; Gomez, Luis Roger Esquivel; Kühnert, Denise; Marz, Manja

Genome Structure, Life Cycle, and Taxonomy of Coronaviruses and the Evolution of SARS-CoV-2 Journal Article

In: Curr Top Microbiol Immunol, vol. 439, pp. 305-339, 2023.

Abstract | Links | BibTeX | Tags: coronavirus, DNA / genomics, evolution, phylogenetics, RNA / transcriptomics

2022

Bruckmann, Carmen; Müller, Susann; zu Siederdissen, Christian Höner

Automatic, fast, hierarchical, and non-overlapping gating of flow cytometric data with flowEMMi v2 Journal Article

In: Comput Struct Biotechnol J, vol. 20, pp. 6473-6489, 2022.

Abstract | Links | BibTeX | Tags:

Houwaart, Torsten; Belhaj, Samir; Tawalbeh, Emran; Nagels, Dirk; Fröhlich, Yara; Finzer, Patrick; Ciruela, Pilar; Sabrià, Aurora; Herrero, Mercè; Andrés, Cristina; Antón, Andrés; Benmoumene, Assia; Asskali, Dounia; Haidar, Hussein; von Dahlen, Janina; Nicolai, Jessica; Stiller, Mygg; Blum, Jacqueline; Lange, Christian; Adelmann, Carla; Schroer, Britta; Osmers, Ute; Grice, Christiane; Kirfel, Phillipp P; Jomaa, Hassan; Strelow, Daniel; Hülse, Lisanna; Pigulla, Moritz; Kreuzer, Pascal; Tyshaieva, Alona; Weber, Jonas; Wienemann, Tobias; Vasconcelos, Malte Kohns; Hoffmann, Katrin; Lübke, Nadine; Hauka, Sandra; Andree, Marcel; Scholz, Claus Jürgen; Jazmati, Nathalie; Göbels, Klaus; Zotz, Rainer; Pfeffer, Klaus; Timm, Jörg; Ehlkes, Lutz; Walker, Andreas; Dilthey, Alexander T; (DeCOI), Deutsche COVID-19 OMICS Initiative

Integrated genomic surveillance enables tracing of person-to-person SARS-CoV-2 transmission chains during community transmission and reveals extensive onward transmission of travel-imported infections, Germany, June to July 2021 Journal Article

In: Euro Surveill, vol. 27, iss. 43, pp. 2101089, 2022.

Abstract | Links | BibTeX | Tags: coronavirus, nanopore, RNA / transcriptomics, viruses

Desiro, Daniel

The complexity of packaging mechanisms in segmented RNA viruses PhD Thesis

2022.

Links | BibTeX | Tags: RNA-RNA interactions, viruses

Mock, Florian

Context sensitive neural networks for the classification of DNA, RNA and protein sequences PhD Thesis

2022.

Links | BibTeX | Tags: classification, machine learning

Mock, Florian; Kretschmer, Fleming; Kriese, Anton; Böcker, Sebastian; Marz, Manja

Taxonomic classification of DNA sequences beyond sequence similarity using deep neural networks Journal Article

In: Proc Natl Acad Sci, vol. 119, iss. 35, pp. e2122636119, 2022.

Abstract | Links | BibTeX | Tags: classification, DNA / genomics, machine learning

Safrastyan, Aram; Wollny, Damian

Network analysis of hepatocellular carcinoma liquid biopsies augmented by single-cell sequencing data Journal Article

In: Front Genet, vol. 13, pp. 921195, 2022.

Abstract | Links | BibTeX | Tags: cancer, single-cell sequencing

Gramzow, Lydia; Klupsch, Katharina; Fernández-Pozo, Noé; Hölzer, Martin; Marz, Manja; Rensing, Stefan A; Theißen, Günter

Comparative transcriptomics identifies candidate genes involved in the evolutionary transition from dehiscent to indehiscent fruits in Lepidium (Brassicaceae) Journal Article

In: BMC Plant Biol, vol. 22, iss. 1, pp. 340, 2022.

Abstract | Links | BibTeX | Tags: RNA / transcriptomics

Lamkiewicz, Kevin

RNA secondary structures in RNA viruses: Why viruses would not exist without RNA secondary structures PhD Thesis

2022.

Links | BibTeX | Tags: RNA structure, RNA-RNA interactions, viruses

Hufsky, Franziska; Abecasis, Ana B.; Agudelo-Romero, Patricia; Bletsa, Magda; Brown, Katherine; Claus, Claudia; Deinhardt-Emmer, Stefanie; Deng, Li; Friedel, Caroline C.; Gismondi, María Inés; Kostaki, Evangelia Georgia; Kühnert, Denise; Kulkarni-Kale, Urmila; Metzner, Karin J.; Meyer, Irmtraud M.; Miozzi, Laura; Nishimura, Luca; Paraskevopoulou, Sofia; Pérez-Cataluña, Alba; Rahlff, Janina; Thomson, Emma; Tumescheit, Charlotte; van der Hoek, Lia; Espen, Lore Van; Vandamme, Anne-Mieke; Zaheri, Maryam; Zuckerman, Neta; Marz, Manja

Women in the European Virus Bioinformatics Center Journal Article

In: Viruses, vol. 14, iss. 7, pp. 1522, 2022.

Abstract | Links | BibTeX | Tags: viruses

Overholt, Will A.; Trumbore, Susan; Xu, Xiaomei; Bornemann, Till L. V.; Probst, Alexander J.; Krüger, Markus; Herrmann, Martina; Thamdrup, Bo; Bristow, Laura A.; Taubert, Martin; Schwab, Valérie F.; Hölzer, Martin; Marz, Manja; Küsel, Kirsten

Carbon fixation rates in groundwater similar to those in oligotrophic marine systems Journal Article

In: Nat Geosci, vol. 15, pp. 561–567, 2022.

Abstract | Links | BibTeX | Tags: groundwater

Fuesslin, Valeria; Krautwurst, Sebastian; Srivastava, Akash; Winter, Doris; Liedigk, Britta; Thye, Thorsten; Herrera-León, Silvia; Wohl, Shirlee; May, Jürgen; Fobil, Julius N.; Eibach, Daniel; Marz, Manja; Schuldt, Kathrin

Prediction of Antibiotic Susceptibility Profiles of Vibrio cholerae Isolates From Whole Genome Illumina and Nanopore Sequencing Data: CholerAegon Journal Article

In: Front Microbiol, vol. 13, pp. 909692, 2022.

Abstract | Links | BibTeX | Tags: bacteria, DNA / genomics, nanopore

Finsterwalder, SK; Loncaric, I; Cabal, A; Szostak, MP; Barf, Lisa-Marie; Marz, Manja; Allerberger, F; Burgener, IA; Tichy, A; Feßler, AT; Schwarz, S; Monecke, S; Ehricht, R; Ruppitsch, W; Spergser, J; Künzel, F

Dogs as carriers of virulent and resistant genotypes of Clostridioides difficile Journal Article

In: Zoonoses Public Health, vol. 69, iss. 6, pp. 673-681, 2022.

Abstract | Links | BibTeX | Tags:

Wollny, Damian; Vernot, Benjamin; Wang, Jie; Hondele, Maria; Safrastyan, Aram; Aron, Franziska; Micheel, Julia; He, Zhisong; Hyman, Anthony; Weis, Karsten; Camp, J. Gray; Tang, T-Y Dora; Treutlein, Barbara

Characterization of RNA content in individual phase-separated coacervate microdroplets Journal Article

In: Nat Commun, vol. 13, iss. 1, pp. 2626, 2022.

Abstract | Links | BibTeX | Tags: RNA / transcriptomics

Žarković, Milena; Hufsky, Franziska; Markert, Udo R; Marz, Manja

The Role of Non-Coding RNAs in the Human Placenta Journal Article

In: Cells, vol. 11, iss. 9, pp. 1588, 2022.

Abstract | Links | BibTeX | Tags: extracellular vesicles, ncRNAs, pregnancy, RNA / transcriptomics

Hufsky, Franziska; Beslic, Denis; Boeckaerts, Dimitri; Duchene, Sebastian; González-Tortuero, Enrique; Gruber, Andreas J; Guo, Jiarong; Jansen, Daan; Juma, John; Kongkitimanon, Kunaphas; Luque, Antoni; Ritsch, Muriel; Lovate, Gabriel Lencioni; Nishimura, Luca; Pas, Célia; Domingo, Esteban; Hodcroft, Emma; Lemey, Philippe; Sullivan, Matthew B; Weber, Friedemann; González-Candelas, Fernando; Krautwurst, Sarah; Pérez-Cataluña, Alba; Randazzo, Walter; Sánchez, Gloria; Marz, Manja

The International Virus Bioinformatics Meeting 2022 Journal Article

In: Viruses, vol. 14, iss. 5, pp. 973, 2022.

Abstract | Links | BibTeX | Tags: annotation, software, virus host interaction, viruses

Hufsky, Franziska; Marz, Manja

Gib mir den Virus und ich sag dir den Wirt Journal Article

In: BIOSpektrum, vol. 28, pp. 225–226, 2022.

Links | BibTeX | Tags: software, virus host interaction, viruses

Barth, Emanuel; Burggraaff, Johannes; Srivastava, Akash; Winckler, Thomas

Nanopore sequencing for mapping of retrotransposon integration sites in the Dictyostelium discoideum genome Journal Article

In: MicroPubl Biol, 2022.

Abstract | Links | BibTeX | Tags: DNA / genomics, nanopore

Aron, Franziska; Wollny, Damian

Single coacervate sequencing Technical Manual

2022.

Abstract | Links | BibTeX | Tags: RNA / transcriptomics

Sorokina, Maria; Barth, Emanuel; Zulfiqar, Mahnoor; Kwantes, Michiel; Pohnert, Georg; Steinbeck, Christoph

Draft genome assembly and sequencing dataset of the marine diatom Skeletonema cf. costatum RCC75 Journal Article

In: Data Brief, vol. 41, pp. 107931, 2022.

Abstract | Links | BibTeX | Tags: DNA / genomics

Sofer, Summer; Lamkiewicz, Kevin; Eilat, Shir Armoza; Partouche, Shirly; Marz, Manja; Moskovits, Neta; Stemmer, Salomon M; Shlomai, Amir; Sklan, Ella H

A genome-wide CRISPR activation screen reveals Hexokinase 1 as a critical factor in promoting resistance to multi-kinase inhibitors in hepatocellular carcinoma cells Journal Article

In: FASEB J , vol. 36, iss. 3, pp. e22191, 2022.

Abstract | Links | BibTeX | Tags: cancer, DNA / genomics

Morales-Prieto, Diana M; Murrieta-Coxca, José M; Stojiljkovic, Milan; Diezel, Celia; Streicher, Priska E; Henao-Restrepo, Julian A; Röstel, Franziska; Lindner, Julia; Witte, Otto W; Weis, Sebastian; Schmeer, Christian; Marz, Manja

Small Extracellular Vesicles from Peripheral Blood of Aged Mice Pass the Blood-Brain Barrier and Induce Glial Cell Activation. Journal Article

In: Cells, vol. 11, iss. 4, pp. 625, 2022.

Abstract | Links | BibTeX | Tags: aging, extracellular vesicles

Fuchs, Jonas; Lamkiewicz, Kevin; Kolesnikova, Larissa; Hölzer, Martin; Marz, Manja; Kochs, Georg

Comparative study of ten thogotovirus isolates and their distinct in vivo characteristics Journal Article

In: J Virol, 2022.

Abstract | Links | BibTeX | Tags: phylogenetics, viruses

2021

Wendisch, Daniel; Dietrich, Oliver; Mari, Tommaso; von Stillfried, Saskia; Ibarra, Ignacio L.; Mittermaier, Mirja; Mache, Christin; Chua, Robert Lorenz; Knoll, Rainer; Timm, Sara; Brumhard, Sophia; Krammer, Tobias; Zauber, Henrik; Hiller, Anna Luisa; Pascual-Reguant, Anna; Mothes, Ronja; Bülow, Roman David; Schulze, Jessica; Leipold, Alexander M.; Djudjaj, Sonja; Erhard, Florian; Geffers, Robert; Pott, Fabian; Kazmierski, Julia; Radke, Josefine; Pergantis, Panagiotis; Baßler, Kevin; Conrad, Claudia; Aschenbrenner, Anna C.; Sawitzki, Birgit; Landthaler, Markus; Wyler, Emanuel; Horst, David; (DeCOI), Deutsche COVID-19 OMICS Initiative; Hippenstiel, Stefan; Hocke, Andreas; Heppner, Frank L.; Uhrig, Alexander; Garcia, Carmen; Machleidt, Felix; Herold, Susanne; Elezkurtaj, Sefer; Thibeault, Charlotte; Witzenrath, Martin; Cochain, Clément; Suttorp, Norbert; Drosten, Christian; Goffinet, Christine; Kurth, Florian; Schultze, Joachim L.; Radbruch, Helena; Ochs, Matthias; Eils, Roland; Müller-Redetzky, Holger; Hauser, Anja E.; Luecken, Malte D.; Theis, Fabian J.; Conrad, Christian; Wolff, Thorsten; Boor, Peter; Selbach, Matthias; Saliba, Antoine-Emmanuel; Sander, Leif Erik

SARS-CoV-2 infection triggers profibrotic macrophage responses and lung fibrosis Journal Article

In: Cell, vol. 184, no. 26, pp. 6243-6261, 2021.

Abstract | Links | BibTeX | Tags: coronavirus, virus host interaction, viruses

Barth, Emanuel; Srivastava, Akash; Wengerodt, Diane; Stojiljkovic, Milan; Axer, Hubertus; Witte, Otto W; Kretz, Alexandra; Marz, Manja

Age-dependent expression changes of circadian system-related genes reveal a potentially conserved link to aging Journal Article

In: Aging, vol. 13, no. 24, pp. 25694-25716, 2021.

Abstract | Links | BibTeX | Tags: aging, RNA / transcriptomics

Chaudhari, Narendrakumar M.; Overholt, Will A.; Figueroa-Gonzalez, Perla Abigail; Taubert, Martin; Bornemann, Till L. V.; Probst, Alexander J.; Hölzer, Martin; Marz, Manja; Küsel, Kirsten

The economical lifestyle of CPR bacteria in groundwater allows little preference for environmental drivers Journal Article

In: Environ Microbiome, vol. 16, no. 1, pp. 24, 2021.

Abstract | Links | BibTeX | Tags: groundwater, metagenomics

Christ, Bruno; Collatz, Maximilian; Dahmen, Uta; Herrmann, Karl-Heinz; Höpfl, Sebastian; König, Matthias; Lambers, Lena; Marz, Manja; Meyer, Daria; Radde, Nicole; Reichenbach, Jürgen R.; Ricken, Tim; Tautenhahn, Hans-Michael

Hepatectomy-Induced Alterations in Hepatic Perfusion and Function - Toward Multi-Scale Computational Modeling for a Better Prediction of Post-hepatectomy Liver Function Journal Article

In: Front Physiol, vol. 12, pp. 733868, 2021.

Abstract | Links | BibTeX | Tags: liver, RNA / transcriptomics

Micheel, Julia; Safrastyan, Aram; Wollny, Damian

Advances in Non-Coding RNA Sequencing Journal Article

In: Noncoding RNA, vol. 7, no. 4, pp. 70, 2021.

Abstract | Links | BibTeX | Tags: ncRNAs, RNA / transcriptomics

198 entries « 1 of 4 »